Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 SLC25A24P2-201ENST00000415059 510 ntBASIC17.88■□□□□ 0.45
ALPK3Q96L96 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 KRT90P-201ENST00000549264 1064 ntBASIC17.88■□□□□ 0.45
ALPK3Q96L96 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 MIR326-201ENST00000362220 95 ntBASIC17.88■□□□□ 0.45
ALPK3Q96L96 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 AL355864.2-201ENST00000447420 863 ntBASIC17.88■□□□□ 0.45
ALPK3Q96L96 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 AC106760.1-201ENST00000508690 800 ntBASIC17.88■□□□□ 0.45
ALPK3Q96L96 AP000812.2-201ENST00000538934 718 ntBASIC17.88■□□□□ 0.45
ALPK3Q96L96 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.88■□□□□ 0.45
ALPK3Q96L96 AC020765.3-201ENST00000613051 740 ntBASIC17.88■□□□□ 0.45
ALPK3Q96L96 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ALPK3Q96L96 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 AL355312.1-201ENST00000407115 2176 ntBASIC17.87■□□□□ 0.45
ALPK3Q96L96 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 AC026954.1-201ENST00000429771 1293 ntBASIC17.87■□□□□ 0.45
ALPK3Q96L96 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 RN7SL399P-201ENST00000471648 279 ntBASIC17.87■□□□□ 0.45
ALPK3Q96L96 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 PTP4A1P2-201ENST00000546033 454 ntBASIC17.87■□□□□ 0.45
ALPK3Q96L96 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 RHOXF1P1-202ENST00000635473 501 ntBASIC17.87■□□□□ 0.45
ALPK3Q96L96 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 LETM1P2-201ENST00000597330 2178 ntBASIC17.87■□□□□ 0.45
ALPK3Q96L96 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALPK3Q96L96 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.87■□□□□ 0.45
ALPK3Q96L96 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 AC036164.1-201ENST00000570544 333 ntBASIC17.86■□□□□ 0.45
ALPK3Q96L96 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.86■□□□□ 0.45
ALPK3Q96L96 AC079328.1-201ENST00000560358 952 ntBASIC17.86■□□□□ 0.45
ALPK3Q96L96 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALPK3Q96L96 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms