Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.84■□□□□ 0.29
RETP07949 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.84■□□□□ 0.29
RETP07949 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.84■□□□□ 0.29
RETP07949 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.84■□□□□ 0.29
RETP07949 U91328.1-201ENST00000437528 223 ntBASIC16.84■□□□□ 0.29
RETP07949 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.84■□□□□ 0.29
RETP07949 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.84■□□□□ 0.29
RETP07949 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.84■□□□□ 0.29
RETP07949 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.84■□□□□ 0.29
RETP07949 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RETP07949 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.84■□□□□ 0.29
RETP07949 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
RETP07949 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.84■□□□□ 0.29
RETP07949 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.84■□□□□ 0.29
RETP07949 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.84■□□□□ 0.29
RETP07949 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RETP07949 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RETP07949 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.83■□□□□ 0.29
RETP07949 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RETP07949 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RETP07949 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RETP07949 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.83■□□□□ 0.28
RETP07949 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.83■□□□□ 0.28
RETP07949 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.83■□□□□ 0.28
RETP07949 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RETP07949 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RETP07949 AC027369.6-201ENST00000525520 931 ntBASIC16.83■□□□□ 0.28
RETP07949 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RETP07949 AC107918.2-201ENST00000530817 355 ntBASIC16.83■□□□□ 0.28
RETP07949 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RETP07949 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.83■□□□□ 0.28
RETP07949 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.83■□□□□ 0.28
RETP07949 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.83■□□□□ 0.28
RETP07949 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.83■□□□□ 0.28
RETP07949 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.83■□□□□ 0.28
RETP07949 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.83■□□□□ 0.28
RETP07949 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RETP07949 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 AC073592.8-201ENST00000624126 511 ntBASIC16.83■□□□□ 0.28
RETP07949 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.83■□□□□ 0.28
RETP07949 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.83■□□□□ 0.28
RETP07949 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.83■□□□□ 0.28
RETP07949 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.83■□□□□ 0.28
RETP07949 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.83■□□□□ 0.28
RETP07949 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RETP07949 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RETP07949 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.82■□□□□ 0.28
RETP07949 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.82■□□□□ 0.28
RETP07949 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RETP07949 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.82■□□□□ 0.28
RETP07949 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RETP07949 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RETP07949 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.82■□□□□ 0.28
RETP07949 AC100757.3-201ENST00000622361 1406 ntBASIC16.82■□□□□ 0.28
RETP07949 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RETP07949 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.82■□□□□ 0.28
RETP07949 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.82■□□□□ 0.28
RETP07949 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.82■□□□□ 0.28
RETP07949 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.82■□□□□ 0.28
RETP07949 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms