Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 MIR943-201ENST00000401286 94 ntBASIC18.08■□□□□ 0.48
USP15Q9Y4E8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 AL671277.1-201ENST00000429656 993 ntBASIC18.08■□□□□ 0.48
USP15Q9Y4E8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 SPDYE11-202ENST00000450699 704 ntBASIC18.08■□□□□ 0.48
USP15Q9Y4E8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 SPDYE9P-201ENST00000570642 692 ntBASIC18.08■□□□□ 0.48
USP15Q9Y4E8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 SPDYE10P-202ENST00000612005 668 ntBASIC18.08■□□□□ 0.48
USP15Q9Y4E8 SPDYE8P-202ENST00000612377 668 ntBASIC18.08■□□□□ 0.48
USP15Q9Y4E8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.08■□□□□ 0.48
USP15Q9Y4E8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP15Q9Y4E8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 CICP6-201ENST00000457191 2729 ntBASIC18.07■□□□□ 0.48
USP15Q9Y4E8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 AL590787.1-201ENST00000568856 1315 ntBASIC18.07■□□□□ 0.48
USP15Q9Y4E8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 TFAMP1-201ENST00000412727 736 ntBASIC18.07■□□□□ 0.48
USP15Q9Y4E8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 FAM86C2P-203ENST00000528684 1004 ntBASIC18.07■□□□□ 0.48
USP15Q9Y4E8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 AC099522.2-201ENST00000607001 744 ntBASIC18.07■□□□□ 0.48
USP15Q9Y4E8 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 AL138688.1-201ENST00000624851 1594 ntBASIC18.07■□□□□ 0.48
USP15Q9Y4E8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 BX276092.7-203ENST00000637198 1536 ntBASIC18.07■□□□□ 0.48
USP15Q9Y4E8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 PCDH8P1-201ENST00000428983 2773 ntBASIC18.07■□□□□ 0.48
USP15Q9Y4E8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.07■□□□□ 0.48
USP15Q9Y4E8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 TUBB3P1-201ENST00000405796 1332 ntBASIC18.06■□□□□ 0.48
USP15Q9Y4E8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.06■□□□□ 0.48
USP15Q9Y4E8 AL592309.1-201ENST00000443127 649 ntBASIC18.06■□□□□ 0.48
USP15Q9Y4E8 GAPDHP21-201ENST00000450301 1010 ntBASIC18.06■□□□□ 0.48
USP15Q9Y4E8 UGT1A2P-201ENST00000454886 866 ntBASIC18.06■□□□□ 0.48
USP15Q9Y4E8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USP15Q9Y4E8 AC069335.1-201ENST00000489972 472 ntBASIC18.06■□□□□ 0.48
USP15Q9Y4E8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms