Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.49□□□□□ -0.25
Trim8Q99PJ2 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Gm2445-201ENSMUST00000182798 989 ntBASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.48□□□□□ -0.25
Trim8Q99PJ2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Gm17271-201ENSMUST00000165535 355 ntBASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.48□□□□□ -0.25
Trim8Q99PJ2 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.48□□□□□ -0.25
Trim8Q99PJ2 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim8Q99PJ2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Gm2810-201ENSMUST00000118681 990 ntBASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim8Q99PJ2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms