Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.32■□□□□ 0.04
Tpm1P58771 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.32■□□□□ 0.04
Tpm1P58771 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tpm1P58771 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Tpm1P58771 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Tpm1P58771 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.32■□□□□ 0.04
Tpm1P58771 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.32■□□□□ 0.04
Tpm1P58771 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Tpm1P58771 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.32■□□□□ 0.04
Tpm1P58771 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Tpm1P58771 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.32■□□□□ 0.04
Tpm1P58771 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tpm1P58771 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tpm1P58771 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Tpm1P58771 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.31■□□□□ 0.04
Tpm1P58771 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tpm1P58771 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tpm1P58771 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Tpm1P58771 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tpm1P58771 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.31■□□□□ 0.04
Tpm1P58771 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Gm15957-201ENSMUST00000118893 974 ntBASIC15.31■□□□□ 0.04
Tpm1P58771 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tpm1P58771 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.31■□□□□ 0.04
Tpm1P58771 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.31■□□□□ 0.04
Tpm1P58771 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.31■□□□□ 0.04
Tpm1P58771 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.31■□□□□ 0.04
Tpm1P58771 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.31■□□□□ 0.04
Tpm1P58771 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tpm1P58771 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tpm1P58771 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tpm1P58771 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tpm1P58771 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.3■□□□□ 0.04
Tpm1P58771 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Gm14140-201ENSMUST00000119999 995 ntBASIC15.3■□□□□ 0.04
Tpm1P58771 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tpm1P58771 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Gm18737-201ENSMUST00000173594 937 ntBASIC15.3■□□□□ 0.04
Tpm1P58771 Gm2445-201ENSMUST00000182798 989 ntBASIC15.3■□□□□ 0.04
Tpm1P58771 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.3■□□□□ 0.04
Tpm1P58771 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Gm2651-201ENSMUST00000203560 838 ntBASIC15.3■□□□□ 0.04
Tpm1P58771 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Tpm1P58771 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.3■□□□□ 0.04
Tpm1P58771 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.3■□□□□ 0.04
Tpm1P58771 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.3■□□□□ 0.04
Tpm1P58771 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Tpm1P58771 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.3■□□□□ 0.04
Tpm1P58771 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tpm1P58771 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tpm1P58771 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Tpm1P58771 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms