Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL15A1P39059 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COL15A1P39059 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL15A1P39059 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.01■□□□□ 0.95
COL15A1P39059 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.01■□□□□ 0.95
COL15A1P39059 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21■□□□□ 0.95
COL15A1P39059 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL15A1P39059 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21■□□□□ 0.95
COL15A1P39059 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL15A1P39059 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21■□□□□ 0.95
COL15A1P39059 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21■□□□□ 0.95
COL15A1P39059 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL15A1P39059 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21■□□□□ 0.95
COL15A1P39059 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL15A1P39059 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21■□□□□ 0.95
COL15A1P39059 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL15A1P39059 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21■□□□□ 0.95
COL15A1P39059 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21■□□□□ 0.95
COL15A1P39059 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21■□□□□ 0.95
COL15A1P39059 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL15A1P39059 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL15A1P39059 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COL15A1P39059 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COL15A1P39059 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
COL15A1P39059 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL15A1P39059 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
COL15A1P39059 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.99■□□□□ 0.95
COL15A1P39059 ARSEP1-201ENST00000420443 635 ntBASIC20.99■□□□□ 0.95
COL15A1P39059 ATP5G2P4-201ENST00000442175 420 ntBASIC20.99■□□□□ 0.95
COL15A1P39059 ZNF890P-202ENST00000530367 1156 ntBASIC20.99■□□□□ 0.95
COL15A1P39059 AL079307.3-201ENST00000556114 283 ntBASIC20.99■□□□□ 0.95
COL15A1P39059 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.99■□□□□ 0.95
COL15A1P39059 MIR6752-201ENST00000618442 71 ntBASIC20.99■□□□□ 0.95
COL15A1P39059 AC007541.1-201ENST00000570282 1469 ntBASIC20.99■□□□□ 0.95
COL15A1P39059 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.99■□□□□ 0.95
COL15A1P39059 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
COL15A1P39059 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.99■□□□□ 0.95
COL15A1P39059 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 SNX33P1-201ENST00000592116 1762 ntBASIC20.99■□□□□ 0.95
COL15A1P39059 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
COL15A1P39059 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
COL15A1P39059 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL15A1P39059 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.98■□□□□ 0.95
COL15A1P39059 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.98■□□□□ 0.95
COL15A1P39059 AC138969.3-201ENST00000546612 1459 ntBASIC20.98■□□□□ 0.95
COL15A1P39059 AC138932.2-201ENST00000548268 1459 ntBASIC20.98■□□□□ 0.95
COL15A1P39059 AC126755.4-201ENST00000549796 1459 ntBASIC20.98■□□□□ 0.95
COL15A1P39059 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COL15A1P39059 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
COL15A1P39059 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.98■□□□□ 0.95
COL15A1P39059 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.98■□□□□ 0.95
COL15A1P39059 WASH4P-201ENST00000564273 1246 ntBASIC20.98■□□□□ 0.95
COL15A1P39059 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.98■□□□□ 0.95
COL15A1P39059 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 AL139011.1-202ENST00000642063 584 ntBASIC20.98■□□□□ 0.95
COL15A1P39059 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COL15A1P39059 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COL15A1P39059 AC006277.1-201ENST00000624348 1610 ntBASIC20.98■□□□□ 0.95
COL15A1P39059 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.98■□□□□ 0.95
COL15A1P39059 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COL15A1P39059 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.98■□□□□ 0.95
COL15A1P39059 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
COL15A1P39059 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COL15A1P39059 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
COL15A1P39059 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL15A1P39059 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COL15A1P39059 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.97■□□□□ 0.95
COL15A1P39059 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 AC098859.1-201ENST00000502915 1238 ntBASIC20.97■□□□□ 0.95
COL15A1P39059 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COL15A1P39059 AC135586.1-201ENST00000539323 574 ntBASIC20.97■□□□□ 0.95
COL15A1P39059 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.97■□□□□ 0.95
COL15A1P39059 AC010336.2-201ENST00000564226 506 ntBASIC20.97■□□□□ 0.95
COL15A1P39059 IGHV3-72-202ENST00000621503 303 ntBASIC20.97■□□□□ 0.95
COL15A1P39059 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.97■□□□□ 0.95
COL15A1P39059 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COL15A1P39059 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.97■□□□□ 0.95
COL15A1P39059 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms