Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Gm43514-201ENSMUST00000198852 424 ntBASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Rubie-203ENSMUST00000227803 2430 ntBASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim13Q9CYB0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Gm18206-201ENSMUST00000207027 926 ntBASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Gm18041-201ENSMUST00000218210 618 ntBASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Psmb5-202ENSMUST00000227257 622 ntBASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim13Q9CYB0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim13Q9CYB0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim13Q9CYB0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.71□□□□□ -0.38
Trim13Q9CYB0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trim13Q9CYB0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim13Q9CYB0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim13Q9CYB0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim13Q9CYB0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim13Q9CYB0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.71□□□□□ -0.38
Trim13Q9CYB0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim13Q9CYB0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms