Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 PAWRP1-201ENST00000451083 565 ntBASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 OR7E14P-202ENST00000530490 1290 ntBASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 AC006504.4-201ENST00000592118 1568 ntBASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 TOP3BP1-201ENST00000420768 1380 ntBASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TRAF3IP1Q8TDR0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 RPS2P1-201ENST00000434010 821 ntBASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 AC087163.2-201ENST00000457299 853 ntBASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 AL805961.1-202ENST00000641562 540 ntBASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP1Q8TDR0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 AC068587.6-202ENST00000641839 5619 ntBASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 UNC93B7-201ENST00000509439 705 ntBASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP1Q8TDR0 AC006277.1-201ENST00000624348 1610 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms