Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.69■□□□□ 0.74
NEDD4P46934 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.69■□□□□ 0.74
NEDD4P46934 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.69■□□□□ 0.74
NEDD4P46934 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NEDD4P46934 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NEDD4P46934 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.69■□□□□ 0.74
NEDD4P46934 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.69■□□□□ 0.74
NEDD4P46934 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NEDD4P46934 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NEDD4P46934 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.68■□□□□ 0.74
NEDD4P46934 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.68■□□□□ 0.74
NEDD4P46934 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.68■□□□□ 0.74
NEDD4P46934 ELL2P1-201ENST00000413990 1906 ntBASIC19.68■□□□□ 0.74
NEDD4P46934 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.68■□□□□ 0.74
NEDD4P46934 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.68■□□□□ 0.74
NEDD4P46934 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.68■□□□□ 0.74
NEDD4P46934 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.68■□□□□ 0.74
NEDD4P46934 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.68■□□□□ 0.74
NEDD4P46934 AC005829.1-201ENST00000570002 483 ntBASIC19.68■□□□□ 0.74
NEDD4P46934 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.68■□□□□ 0.74
NEDD4P46934 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.68■□□□□ 0.74
NEDD4P46934 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.68■□□□□ 0.74
NEDD4P46934 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.68■□□□□ 0.74
NEDD4P46934 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.68■□□□□ 0.74
NEDD4P46934 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NEDD4P46934 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NEDD4P46934 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEDD4P46934 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NEDD4P46934 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEDD4P46934 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.67■□□□□ 0.74
NEDD4P46934 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEDD4P46934 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEDD4P46934 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.67■□□□□ 0.74
NEDD4P46934 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEDD4P46934 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.67■□□□□ 0.74
NEDD4P46934 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NEDD4P46934 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEDD4P46934 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NEDD4P46934 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.67■□□□□ 0.74
NEDD4P46934 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.67■□□□□ 0.74
NEDD4P46934 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEDD4P46934 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.67■□□□□ 0.74
NEDD4P46934 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.67■□□□□ 0.74
NEDD4P46934 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEDD4P46934 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.67■□□□□ 0.74
NEDD4P46934 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEDD4P46934 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.67■□□□□ 0.74
NEDD4P46934 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
NEDD4P46934 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.66■□□□□ 0.74
NEDD4P46934 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.66■□□□□ 0.74
NEDD4P46934 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.66■□□□□ 0.74
NEDD4P46934 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.66■□□□□ 0.74
NEDD4P46934 MIR1233-2-201ENST00000408138 82 ntBASIC19.66■□□□□ 0.74
NEDD4P46934 MIR1233-1-201ENST00000408722 82 ntBASIC19.66■□□□□ 0.74
NEDD4P46934 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.66■□□□□ 0.74
NEDD4P46934 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.66■□□□□ 0.74
NEDD4P46934 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.66■□□□□ 0.74
NEDD4P46934 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NEDD4P46934 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
NEDD4P46934 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.66■□□□□ 0.74
NEDD4P46934 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
NEDD4P46934 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.66■□□□□ 0.74
NEDD4P46934 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NEDD4P46934 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 PCDHB19P-201ENST00000570871 2371 ntBASIC19.66■□□□□ 0.74
NEDD4P46934 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.66■□□□□ 0.74
NEDD4P46934 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEDD4P46934 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
NEDD4P46934 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NEDD4P46934 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.65■□□□□ 0.74
NEDD4P46934 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms