Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLSTN1O94985 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CLSTN1O94985 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.64■□□□□ 0.57
CLSTN1O94985 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CLSTN1O94985 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CLSTN1O94985 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.64■□□□□ 0.57
CLSTN1O94985 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CLSTN1O94985 RNPS1P1-201ENST00000507437 918 ntBASIC18.64■□□□□ 0.57
CLSTN1O94985 OR7E14P-202ENST00000530490 1290 ntBASIC18.64■□□□□ 0.57
CLSTN1O94985 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.64■□□□□ 0.57
CLSTN1O94985 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.64■□□□□ 0.57
CLSTN1O94985 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.64■□□□□ 0.57
CLSTN1O94985 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.64■□□□□ 0.57
CLSTN1O94985 AC064862.7-201ENST00000604520 867 ntBASIC18.64■□□□□ 0.57
CLSTN1O94985 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.64■□□□□ 0.57
CLSTN1O94985 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.64■□□□□ 0.57
CLSTN1O94985 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.64■□□□□ 0.57
CLSTN1O94985 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CLSTN1O94985 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.64■□□□□ 0.57
CLSTN1O94985 AC016396.2-201ENST00000562575 1417 ntBASIC18.64■□□□□ 0.57
CLSTN1O94985 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLSTN1O94985 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLSTN1O94985 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.63■□□□□ 0.57
CLSTN1O94985 AC093525.9-201ENST00000624961 1746 ntBASIC18.63■□□□□ 0.57
CLSTN1O94985 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.63■□□□□ 0.57
CLSTN1O94985 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.63■□□□□ 0.57
CLSTN1O94985 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLSTN1O94985 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLSTN1O94985 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.63■□□□□ 0.57
CLSTN1O94985 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.63■□□□□ 0.57
CLSTN1O94985 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.63■□□□□ 0.57
CLSTN1O94985 LINC00982-205ENST00000420957 435 ntBASIC18.63■□□□□ 0.57
CLSTN1O94985 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.63■□□□□ 0.57
CLSTN1O94985 KRT18P67-201ENST00000432816 1264 ntBASIC18.63■□□□□ 0.57
CLSTN1O94985 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.63■□□□□ 0.57
CLSTN1O94985 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.63■□□□□ 0.57
CLSTN1O94985 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.63■□□□□ 0.57
CLSTN1O94985 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CLSTN1O94985 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.63■□□□□ 0.57
CLSTN1O94985 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.63■□□□□ 0.57
CLSTN1O94985 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.63■□□□□ 0.57
CLSTN1O94985 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLSTN1O94985 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.62■□□□□ 0.57
CLSTN1O94985 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CLSTN1O94985 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CLSTN1O94985 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLSTN1O94985 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.62■□□□□ 0.57
CLSTN1O94985 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.62■□□□□ 0.57
CLSTN1O94985 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.62■□□□□ 0.57
CLSTN1O94985 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.62■□□□□ 0.57
CLSTN1O94985 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.62■□□□□ 0.57
CLSTN1O94985 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.62■□□□□ 0.57
CLSTN1O94985 AC139887.3-201ENST00000568585 713 ntBASIC18.62■□□□□ 0.57
CLSTN1O94985 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.62■□□□□ 0.57
CLSTN1O94985 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms