Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm5177-201ENSMUST00000183092 997 ntBASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Gm27628-201ENSMUST00000184911 107 ntBASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Gm15590-201ENSMUST00000078419 552 ntBASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.44□□□□□ -0.42
Krt88Q9CPR6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Mir5131-201ENSMUST00000175426 93 ntBASIC12.43□□□□□ -0.42
Krt88Q9CPR6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Gm2651-201ENSMUST00000203560 838 ntBASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Gm44719-201ENSMUST00000206404 149 ntBASIC12.43□□□□□ -0.42
Krt88Q9CPR6 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms