Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 AC105917.1-201ENST00000506637 2539 ntBASIC16.89■□□□□ 0.29
TRIM4Q9C037 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 AP003733.1-201ENST00000491725 852 ntBASIC16.89■□□□□ 0.29
TRIM4Q9C037 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 AC139887.3-201ENST00000568585 713 ntBASIC16.89■□□□□ 0.29
TRIM4Q9C037 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM4Q9C037 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM4Q9C037 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 AL603756.1-201ENST00000606511 2163 ntBASIC16.88■□□□□ 0.29
TRIM4Q9C037 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 KRT89P-201ENST00000620027 1478 ntBASIC16.88■□□□□ 0.29
TRIM4Q9C037 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 NORAD-201ENST00000565493 5339 ntBASIC16.88■□□□□ 0.29
TRIM4Q9C037 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 AL390719.2-201ENST00000606993 987 ntBASIC16.88■□□□□ 0.29
TRIM4Q9C037 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 AC022188.1-201ENST00000620960 1664 ntBASIC16.88■□□□□ 0.29
TRIM4Q9C037 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM4Q9C037 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM4Q9C037 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 MINOS1P3-201ENST00000457048 203 ntBASIC16.87■□□□□ 0.29
TRIM4Q9C037 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms