Protein–RNA interactions for Protein: Q04207

Rela, Transcription factor p65, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RelaQ04207 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.39□□□□□ -0.11
RelaQ04207 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.39□□□□□ -0.11
RelaQ04207 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.39□□□□□ -0.11
RelaQ04207 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RelaQ04207 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RelaQ04207 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.39□□□□□ -0.11
RelaQ04207 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RelaQ04207 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.39□□□□□ -0.11
RelaQ04207 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.38□□□□□ -0.11
RelaQ04207 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RelaQ04207 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.38□□□□□ -0.11
RelaQ04207 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.38□□□□□ -0.11
RelaQ04207 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.38□□□□□ -0.11
RelaQ04207 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.38□□□□□ -0.11
RelaQ04207 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.38□□□□□ -0.11
RelaQ04207 Gm7774-201ENSMUST00000200064 533 ntBASIC14.38□□□□□ -0.11
RelaQ04207 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.38□□□□□ -0.11
RelaQ04207 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.38□□□□□ -0.11
RelaQ04207 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.38□□□□□ -0.11
RelaQ04207 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RelaQ04207 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.38□□□□□ -0.11
RelaQ04207 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RelaQ04207 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RelaQ04207 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RelaQ04207 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RelaQ04207 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
RelaQ04207 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.37□□□□□ -0.11
RelaQ04207 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RelaQ04207 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RelaQ04207 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.37□□□□□ -0.11
RelaQ04207 Gm25948-201ENSMUST00000175334 112 ntBASIC14.37□□□□□ -0.11
RelaQ04207 Mir6956-201ENSMUST00000183598 62 ntBASIC14.37□□□□□ -0.11
RelaQ04207 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.37□□□□□ -0.11
RelaQ04207 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.37□□□□□ -0.11
RelaQ04207 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RelaQ04207 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RelaQ04207 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.37□□□□□ -0.11
RelaQ04207 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
RelaQ04207 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RelaQ04207 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RelaQ04207 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RelaQ04207 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RelaQ04207 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RelaQ04207 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.36□□□□□ -0.11
RelaQ04207 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RelaQ04207 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RelaQ04207 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RelaQ04207 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms