Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h2P0C090 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h2P0C090 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h2P0C090 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.04□□□□□ -0.16
Rc3h2P0C090 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Gm4984-201ENSMUST00000115987 360 ntBASIC14.04□□□□□ -0.16
Rc3h2P0C090 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.04□□□□□ -0.16
Rc3h2P0C090 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.04□□□□□ -0.16
Rc3h2P0C090 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h2P0C090 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.03□□□□□ -0.16
Rc3h2P0C090 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.03□□□□□ -0.16
Rc3h2P0C090 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.03□□□□□ -0.16
Rc3h2P0C090 Gm12134-201ENSMUST00000122109 520 ntBASIC14.03□□□□□ -0.16
Rc3h2P0C090 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.03□□□□□ -0.16
Rc3h2P0C090 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Gm8584-201ENSMUST00000171982 758 ntBASIC14.03□□□□□ -0.16
Rc3h2P0C090 Gm7287-201ENSMUST00000205267 602 ntBASIC14.03□□□□□ -0.16
Rc3h2P0C090 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.03□□□□□ -0.16
Rc3h2P0C090 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h2P0C090 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h2P0C090 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h2P0C090 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms