Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Gm44487-201ENSMUST00000205145 325 ntBASIC16.55■□□□□ 0.24
NpcdF8VQB8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.54■□□□□ 0.24
NpcdF8VQB8 Gm5687-201ENSMUST00000118252 640 ntBASIC16.54■□□□□ 0.24
NpcdF8VQB8 Gm14381-201ENSMUST00000122105 414 ntBASIC16.54■□□□□ 0.24
NpcdF8VQB8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Gm6334-201ENSMUST00000207083 228 ntBASIC16.54■□□□□ 0.24
NpcdF8VQB8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Gm10268-201ENSMUST00000085340 555 ntBASIC16.54■□□□□ 0.24
NpcdF8VQB8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NpcdF8VQB8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NpcdF8VQB8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.53■□□□□ 0.24
NpcdF8VQB8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.53■□□□□ 0.24
NpcdF8VQB8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.53■□□□□ 0.24
NpcdF8VQB8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.53■□□□□ 0.24
NpcdF8VQB8 Gm37986-201ENSMUST00000193285 383 ntBASIC16.53■□□□□ 0.24
NpcdF8VQB8 Gm42550-201ENSMUST00000201553 960 ntBASIC16.53■□□□□ 0.24
NpcdF8VQB8 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.53■□□□□ 0.24
NpcdF8VQB8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NpcdF8VQB8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.52■□□□□ 0.24
NpcdF8VQB8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NpcdF8VQB8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms