Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 AC238940.1-201ENSMUST00000225106 1858 ntBASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Gm25925-201ENSMUST00000158314 306 ntBASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Gm6659-201ENSMUST00000174752 547 ntBASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC9.87□□□□□ -0.83
Trav8-1A0A075B641 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav8-1A0A075B641 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms