Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Gm12485-201ENSMUST00000119641 291 ntBASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Gm15678-201ENSMUST00000117573 960 ntBASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Mir7654-201ENSMUST00000185082 70 ntBASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Gm9908-201ENSMUST00000211534 448 ntBASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpp40Q8R1F9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.77□□□□□ -0.04
Rpp40Q8R1F9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpp40Q8R1F9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpp40Q8R1F9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpp40Q8R1F9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rpp40Q8R1F9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpp40Q8R1F9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rpp40Q8R1F9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rpp40Q8R1F9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Rpp40Q8R1F9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rpp40Q8R1F9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Gm12490-201ENSMUST00000120255 560 ntBASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Gm11424-201ENSMUST00000121929 829 ntBASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Gm18307-201ENSMUST00000206864 949 ntBASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpp40Q8R1F9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms