Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Gm11779-201ENSMUST00000118541 368 ntBASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tsen54Q8C2A2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tsen54Q8C2A2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Mir8117-201ENSMUST00000184773 107 ntBASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Gm5264-201ENSMUST00000190584 848 ntBASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tsen54Q8C2A2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tsen54Q8C2A2 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms