Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 AL353135.1-201ENST00000606729 504 ntBASIC16.4■□□□□ 0.22
SGO1Q5FBB7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.4■□□□□ 0.22
SGO1Q5FBB7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SGO1Q5FBB7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.22
SGO1Q5FBB7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
SGO1Q5FBB7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
SGO1Q5FBB7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 NCF1C-201ENST00000438382 1427 ntBASIC16.39■□□□□ 0.21
SGO1Q5FBB7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 RBM17P3-201ENST00000417687 1192 ntBASIC16.39■□□□□ 0.21
SGO1Q5FBB7 PRYP5-201ENST00000451909 266 ntBASIC16.39■□□□□ 0.21
SGO1Q5FBB7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 AC008608.2-201ENST00000606089 416 ntBASIC16.39■□□□□ 0.21
SGO1Q5FBB7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SGO1Q5FBB7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 HLA-A-202ENST00000376806 1854 ntBASIC16.38■□□□□ 0.21
SGO1Q5FBB7 AC008894.3-201ENST00000624324 3103 ntBASIC16.38■□□□□ 0.21
SGO1Q5FBB7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 SART3-203ENST00000546611 1184 ntBASIC16.38■□□□□ 0.21
SGO1Q5FBB7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 DUX4L17-201ENST00000557360 1267 ntBASIC16.38■□□□□ 0.21
SGO1Q5FBB7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 AC012313.10-201ENST00000623509 926 ntBASIC16.38■□□□□ 0.21
SGO1Q5FBB7 AL139288.1-201ENST00000623748 933 ntBASIC16.38■□□□□ 0.21
SGO1Q5FBB7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SGO1Q5FBB7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms