Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Gm15824-201ENSMUST00000119516 955 ntBASIC13.3□□□□□ -0.28
Atf4Q06507 Gm13740-201ENSMUST00000120590 310 ntBASIC13.3□□□□□ -0.28
Atf4Q06507 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.3□□□□□ -0.28
Atf4Q06507 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.3□□□□□ -0.28
Atf4Q06507 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.3□□□□□ -0.28
Atf4Q06507 Gm37973-201ENSMUST00000195767 1289 ntBASIC13.3□□□□□ -0.28
Atf4Q06507 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC13.3□□□□□ -0.28
Atf4Q06507 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.3□□□□□ -0.28
Atf4Q06507 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.3□□□□□ -0.28
Atf4Q06507 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.3□□□□□ -0.28
Atf4Q06507 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Atf4Q06507 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Atf4Q06507 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Atf4Q06507 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Atf4Q06507 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.29□□□□□ -0.28
Atf4Q06507 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Atf4Q06507 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.29□□□□□ -0.28
Atf4Q06507 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.29□□□□□ -0.28
Atf4Q06507 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.29□□□□□ -0.28
Atf4Q06507 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Atf4Q06507 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Gm28925-201ENSMUST00000188586 168 ntBASIC13.29□□□□□ -0.28
Atf4Q06507 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Atf4Q06507 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.29□□□□□ -0.28
Atf4Q06507 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Gm42478-201ENSMUST00000199252 1467 ntBASIC13.29□□□□□ -0.28
Atf4Q06507 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Atf4Q06507 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf4Q06507 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Atf4Q06507 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Atf4Q06507 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.28□□□□□ -0.28
Atf4Q06507 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Atf4Q06507 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Atf4Q06507 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Atf4Q06507 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Atf4Q06507 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms