Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ERVFC1P60507 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 AL080243.2-201ENST00000418783 582 ntBASIC17.54■□□□□ 0.4
ERVFC1P60507 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.54■□□□□ 0.4
ERVFC1P60507 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.54■□□□□ 0.4
ERVFC1P60507 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.54■□□□□ 0.4
ERVFC1P60507 IGHV3-72-202ENST00000621503 303 ntBASIC17.54■□□□□ 0.4
ERVFC1P60507 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ERVFC1P60507 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.54■□□□□ 0.4
ERVFC1P60507 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ERVFC1P60507 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERVFC1P60507 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.53■□□□□ 0.4
ERVFC1P60507 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.53■□□□□ 0.4
ERVFC1P60507 AL138688.1-201ENST00000624851 1594 ntBASIC17.53■□□□□ 0.4
ERVFC1P60507 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.53■□□□□ 0.4
ERVFC1P60507 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ERVFC1P60507 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.53■□□□□ 0.4
ERVFC1P60507 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
ERVFC1P60507 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
ERVFC1P60507 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
ERVFC1P60507 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
ERVFC1P60507 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.53■□□□□ 0.4
ERVFC1P60507 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.53■□□□□ 0.4
ERVFC1P60507 IGHV3-71-201ENST00000523324 359 ntBASIC17.53■□□□□ 0.4
ERVFC1P60507 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
ERVFC1P60507 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
ERVFC1P60507 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 HILS1-202ENST00000545329 423 ntBASIC17.53■□□□□ 0.4
ERVFC1P60507 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.53■□□□□ 0.4
ERVFC1P60507 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.53■□□□□ 0.4
ERVFC1P60507 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.53■□□□□ 0.4
ERVFC1P60507 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ERVFC1P60507 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.53■□□□□ 0.4
ERVFC1P60507 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ERVFC1P60507 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.53■□□□□ 0.4
ERVFC1P60507 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERVFC1P60507 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ERVFC1P60507 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ERVFC1P60507 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ERVFC1P60507 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
ERVFC1P60507 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ERVFC1P60507 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.52■□□□□ 0.4
ERVFC1P60507 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.52■□□□□ 0.4
ERVFC1P60507 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 AC098614.1-201ENST00000368528 745 ntBASIC17.52■□□□□ 0.4
ERVFC1P60507 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ERVFC1P60507 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.52■□□□□ 0.4
ERVFC1P60507 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.52■□□□□ 0.4
ERVFC1P60507 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.52■□□□□ 0.4
ERVFC1P60507 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.52■□□□□ 0.4
ERVFC1P60507 INE1-201ENST00000456273 945 ntBASIC17.52■□□□□ 0.4
ERVFC1P60507 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ERVFC1P60507 GIMAP3P-201ENST00000495150 836 ntBASIC17.52■□□□□ 0.4
ERVFC1P60507 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ERVFC1P60507 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.52■□□□□ 0.4
ERVFC1P60507 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.52■□□□□ 0.4
ERVFC1P60507 AC010336.2-201ENST00000564226 506 ntBASIC17.52■□□□□ 0.4
ERVFC1P60507 AC104794.3-201ENST00000566840 1248 ntBASIC17.52■□□□□ 0.4
ERVFC1P60507 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.52■□□□□ 0.4
ERVFC1P60507 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.52■□□□□ 0.4
ERVFC1P60507 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.52■□□□□ 0.4
ERVFC1P60507 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.52■□□□□ 0.4
ERVFC1P60507 CHCHD2P3-201ENST00000603038 451 ntBASIC17.52■□□□□ 0.4
ERVFC1P60507 AC004790.1-201ENST00000612686 536 ntBASIC17.52■□□□□ 0.4
ERVFC1P60507 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
ERVFC1P60507 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms