Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN6P56747 AC008764.6-201ENST00000595909 2069 ntBASIC16.1■□□□□ 0.17
CLDN6P56747 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN6P56747 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLDN6P56747 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLDN6P56747 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN6P56747 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN6P56747 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN6P56747 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN6P56747 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CLDN6P56747 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN6P56747 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CLDN6P56747 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN6P56747 SPTLC1P1-201ENST00000447199 261 ntBASIC16.09■□□□□ 0.17
CLDN6P56747 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN6P56747 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN6P56747 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN6P56747 CR383656.12-201ENST00000549567 513 ntBASIC16.09■□□□□ 0.17
CLDN6P56747 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN6P56747 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN6P56747 AC009118.2-201ENST00000613275 655 ntBASIC16.09■□□□□ 0.17
CLDN6P56747 LINC01451-201ENST00000623792 534 ntBASIC16.09■□□□□ 0.17
CLDN6P56747 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN6P56747 AL358472.5-202ENST00000641448 1267 ntBASIC16.09■□□□□ 0.17
CLDN6P56747 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN6P56747 AC067852.2-201ENST00000590513 2313 ntBASIC16.09■□□□□ 0.17
CLDN6P56747 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN6P56747 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN6P56747 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN6P56747 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN6P56747 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN6P56747 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN6P56747 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.08■□□□□ 0.17
CLDN6P56747 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN6P56747 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN6P56747 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.08■□□□□ 0.17
CLDN6P56747 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.08■□□□□ 0.17
CLDN6P56747 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 ATP5G2P4-201ENST00000442175 420 ntBASIC16.08■□□□□ 0.16
CLDN6P56747 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN6P56747 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CLDN6P56747 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN6P56747 AL355312.1-201ENST00000407115 2176 ntBASIC16.08■□□□□ 0.16
CLDN6P56747 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CLDN6P56747 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CLDN6P56747 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN6P56747 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLDN6P56747 AP3S2-216ENST00000617003 1561 ntBASIC16.08■□□□□ 0.16
CLDN6P56747 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN6P56747 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CLDN6P56747 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN6P56747 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN6P56747 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN6P56747 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLDN6P56747 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN6P56747 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN6P56747 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms