Protein–RNA interactions for Protein: Q9ERR1

Ndel1, Nuclear distribution protein nudE-like 1, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndel1Q9ERR1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Gm13597-201ENSMUST00000121239 375 ntBASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndel1Q9ERR1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndel1Q9ERR1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndel1Q9ERR1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Gm11543-201ENSMUST00000120758 370 ntBASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndel1Q9ERR1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndel1Q9ERR1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndel1Q9ERR1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndel1Q9ERR1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms