Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Gm14822-201ENSMUST00000122247 291 ntBASIC13.89□□□□□ -0.19
Vps39Q8R5L3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Gm29541-201ENSMUST00000191351 678 ntBASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps39Q8R5L3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Gm37714-201ENSMUST00000194742 342 ntBASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Dupd1-202ENSMUST00000224735 548 ntBASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps39Q8R5L3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms