Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.5□□□□□ -0.09
CD40P25942 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.5□□□□□ -0.09
CD40P25942 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.5□□□□□ -0.09
CD40P25942 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.5□□□□□ -0.09
CD40P25942 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.5□□□□□ -0.09
CD40P25942 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.49□□□□□ -0.09
CD40P25942 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CD40P25942 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CD40P25942 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.49□□□□□ -0.09
CD40P25942 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.49□□□□□ -0.09
CD40P25942 TSEN15P1-201ENST00000423257 515 ntBASIC14.49□□□□□ -0.09
CD40P25942 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.49□□□□□ -0.09
CD40P25942 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.49□□□□□ -0.09
CD40P25942 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.49□□□□□ -0.09
CD40P25942 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.49□□□□□ -0.09
CD40P25942 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CD40P25942 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.49□□□□□ -0.09
CD40P25942 AC092068.3-201ENST00000587894 2016 ntBASIC14.49□□□□□ -0.09
CD40P25942 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.49□□□□□ -0.09
CD40P25942 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CD40P25942 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD40P25942 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CD40P25942 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CD40P25942 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.48□□□□□ -0.09
CD40P25942 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CD40P25942 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.48□□□□□ -0.09
CD40P25942 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.48□□□□□ -0.09
CD40P25942 AL592309.1-201ENST00000443127 649 ntBASIC14.48□□□□□ -0.09
CD40P25942 AC023141.5-201ENST00000458585 616 ntBASIC14.48□□□□□ -0.09
CD40P25942 AC079140.1-201ENST00000508039 487 ntBASIC14.48□□□□□ -0.09
CD40P25942 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 AC027796.2-201ENST00000575326 344 ntBASIC14.48□□□□□ -0.09
CD40P25942 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.48□□□□□ -0.09
CD40P25942 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CD40P25942 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CD40P25942 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CD40P25942 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CD40P25942 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.48□□□□□ -0.09
CD40P25942 WASH6P-202ENST00000359512 1437 ntBASIC14.48□□□□□ -0.09
CD40P25942 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CD40P25942 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CD40P25942 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD40P25942 OR6D1P-203ENST00000641209 4860 ntBASIC14.48□□□□□ -0.09
CD40P25942 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CD40P25942 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CD40P25942 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD40P25942 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms