Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDNEP1O95476 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDNEP1O95476 PRSS29P-201ENST00000440800 595 ntBASIC19.46■□□□□ 0.71
CTDNEP1O95476 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.46■□□□□ 0.71
CTDNEP1O95476 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.46■□□□□ 0.71
CTDNEP1O95476 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.46■□□□□ 0.71
CTDNEP1O95476 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.46■□□□□ 0.71
CTDNEP1O95476 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CTDNEP1O95476 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTDNEP1O95476 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.46■□□□□ 0.71
CTDNEP1O95476 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDNEP1O95476 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTDNEP1O95476 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CTDNEP1O95476 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.45■□□□□ 0.7
CTDNEP1O95476 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTDNEP1O95476 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDNEP1O95476 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 HCG4-201ENST00000418983 998 ntBASIC19.44■□□□□ 0.7
CTDNEP1O95476 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 VN2R19P-201ENST00000442399 1052 ntBASIC19.44■□□□□ 0.7
CTDNEP1O95476 HCG4B-203ENST00000450128 991 ntBASIC19.44■□□□□ 0.7
CTDNEP1O95476 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.44■□□□□ 0.7
CTDNEP1O95476 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.44■□□□□ 0.7
CTDNEP1O95476 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTDNEP1O95476 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTDNEP1O95476 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDNEP1O95476 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDNEP1O95476 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDNEP1O95476 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CTDNEP1O95476 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDNEP1O95476 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTDNEP1O95476 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms