Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Gm11779-201ENSMUST00000118541 368 ntBASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Gm10275-202ENSMUST00000168697 495 ntBASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Gm10275-201ENSMUST00000092620 635 ntBASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr1Q9CY50 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssr1Q9CY50 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.08■□□□□ 0.01
Ssr1Q9CY50 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Ssr1Q9CY50 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssr1Q9CY50 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssr1Q9CY50 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ssr1Q9CY50 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ssr1Q9CY50 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssr1Q9CY50 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssr1Q9CY50 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.08■□□□□ 0
Ssr1Q9CY50 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.08■□□□□ 0
Ssr1Q9CY50 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.08■□□□□ 0
Ssr1Q9CY50 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.08■□□□□ 0
Ssr1Q9CY50 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.08■□□□□ 0
Ssr1Q9CY50 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ssr1Q9CY50 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.08■□□□□ 0
Ssr1Q9CY50 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Ssr1Q9CY50 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ssr1Q9CY50 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.08■□□□□ 0
Ssr1Q9CY50 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ssr1Q9CY50 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr1Q9CY50 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ssr1Q9CY50 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms