Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC023141.13-201ENST00000604991 943 ntBASIC15.16■□□□□ 0.02
CPNE4Q96A23 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE4Q96A23 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE4Q96A23 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE4Q96A23 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CPNE4Q96A23 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE4Q96A23 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE4Q96A23 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE4Q96A23 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE4Q96A23 AC008894.3-201ENST00000624324 3103 ntBASIC15.16■□□□□ 0.02
CPNE4Q96A23 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE4Q96A23 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE4Q96A23 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE4Q96A23 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CPNE4Q96A23 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE4Q96A23 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CPNE4Q96A23 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CPNE4Q96A23 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE4Q96A23 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE4Q96A23 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE4Q96A23 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 AL353732.1-201ENST00000569618 1459 ntBASIC15.15■□□□□ 0.02
CPNE4Q96A23 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 AL513480.1-201ENST00000451731 511 ntBASIC15.15■□□□□ 0.02
CPNE4Q96A23 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 AP002490.2-201ENST00000524791 560 ntBASIC15.15■□□□□ 0.02
CPNE4Q96A23 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 AC002347.1-201ENST00000569543 541 ntBASIC15.15■□□□□ 0.02
CPNE4Q96A23 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 ACTL9-202ENST00000612068 1252 ntBASIC15.15■□□□□ 0.02
CPNE4Q96A23 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE4Q96A23 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE4Q96A23 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 HCG4-201ENST00000418983 998 ntBASIC15.14■□□□□ 0.01
CPNE4Q96A23 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 KRT18P2-201ENST00000447938 1258 ntBASIC15.14■□□□□ 0.01
CPNE4Q96A23 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 PGAM5P1-201ENST00000518923 814 ntBASIC15.14■□□□□ 0.01
CPNE4Q96A23 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 AL645728.2-201ENST00000641974 660 ntBASIC15.14■□□□□ 0.01
CPNE4Q96A23 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms