Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC006033.1-201ENST00000440505 426 ntBASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 PFN1P12-201ENST00000455938 534 ntBASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 AC068587.3-201ENST00000526613 355 ntBASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 SLC25A47P1-201ENST00000531577 414 ntBASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 AP000812.2-201ENST00000538934 718 ntBASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 RN7SL190P-201ENST00000582519 257 ntBASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL22A1Q8NFW1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 BRI3BPP1-201ENST00000594224 787 ntBASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL22A1Q8NFW1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 COG4-212ENST00000564653 590 ntTSL 5 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 DUX4L45-201ENST00000566406 1057 ntBASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 AL355312.1-201ENST00000407115 2176 ntBASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL22A1Q8NFW1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 AC124283.3-201ENST00000570869 594 ntBASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL22A1Q8NFW1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms