Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Gm13884-201ENSMUST00000118103 829 ntBASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Gm15358-201ENSMUST00000119249 520 ntBASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Gm43514-201ENSMUST00000198852 424 ntBASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccbe1Q3MI99 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Gm43347-201ENSMUST00000200226 580 ntBASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.54□□□□□ -0.4
Ccbe1Q3MI99 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Gm27459-201ENSMUST00000184860 107 ntBASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms