Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 AC068880.1-201ENST00000507289 2297 ntBASIC12.35□□□□□ -0.43
APOC4P55056 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOC4P55056 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC4P55056 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC4P55056 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
APOC4P55056 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC4P55056 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC4P55056 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
APOC4P55056 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
APOC4P55056 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC4P55056 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
APOC4P55056 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 SPDYE11-202ENST00000450699 704 ntBASIC12.34□□□□□ -0.43
APOC4P55056 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
APOC4P55056 AP002490.2-201ENST00000524791 560 ntBASIC12.34□□□□□ -0.43
APOC4P55056 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC4P55056 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
APOC4P55056 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC4P55056 SPDYE9P-201ENST00000570642 692 ntBASIC12.34□□□□□ -0.43
APOC4P55056 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC4P55056 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC4P55056 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.34□□□□□ -0.43
APOC4P55056 SPDYE10P-202ENST00000612005 668 ntBASIC12.34□□□□□ -0.43
APOC4P55056 SPDYE8P-202ENST00000612377 668 ntBASIC12.34□□□□□ -0.43
APOC4P55056 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
APOC4P55056 AC092902.6-201ENST00000641783 218 ntBASIC12.34□□□□□ -0.43
APOC4P55056 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
APOC4P55056 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
APOC4P55056 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC4P55056 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOC4P55056 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOC4P55056 AC131009.4-201ENST00000624048 1740 ntBASIC12.34□□□□□ -0.43
APOC4P55056 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC4P55056 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC4P55056 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
APOC4P55056 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
APOC4P55056 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC4P55056 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC4P55056 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
APOC4P55056 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APOC4P55056 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC4P55056 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC4P55056 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
APOC4P55056 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 SLC25A1P3-201ENST00000395415 828 ntBASIC12.33□□□□□ -0.44
APOC4P55056 PMS2P4-201ENST00000412466 1052 ntBASIC12.33□□□□□ -0.44
APOC4P55056 AL671277.1-201ENST00000429656 993 ntBASIC12.33□□□□□ -0.44
APOC4P55056 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.33□□□□□ -0.44
APOC4P55056 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.33□□□□□ -0.44
APOC4P55056 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC4P55056 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
APOC4P55056 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.33□□□□□ -0.44
APOC4P55056 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC4P55056 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.33□□□□□ -0.44
APOC4P55056 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.33□□□□□ -0.44
APOC4P55056 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC4P55056 RARRES2P8-201ENST00000566335 367 ntBASIC12.33□□□□□ -0.44
APOC4P55056 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.33□□□□□ -0.44
APOC4P55056 MIR3909-201ENST00000579518 119 ntBASIC12.33□□□□□ -0.44
APOC4P55056 MPDU1-223ENST00000582151 728 ntBASIC12.33□□□□□ -0.44
APOC4P55056 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
APOC4P55056 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
APOC4P55056 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms