Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.7■□□□□ 0.42
RB1P06400 AC104794.3-201ENST00000566840 1248 ntBASIC17.7■□□□□ 0.42
RB1P06400 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 AL162274.1-201ENST00000617191 1098 ntBASIC17.7■□□□□ 0.42
RB1P06400 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RB1P06400 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.7■□□□□ 0.42
RB1P06400 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RB1P06400 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.7■□□□□ 0.42
RB1P06400 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.69■□□□□ 0.42
RB1P06400 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RB1P06400 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RB1P06400 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.69■□□□□ 0.42
RB1P06400 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RB1P06400 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 DGCR5-201ENST00000399539 862 ntBASIC17.69■□□□□ 0.42
RB1P06400 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.69■□□□□ 0.42
RB1P06400 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.69■□□□□ 0.42
RB1P06400 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
RB1P06400 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RB1P06400 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.69■□□□□ 0.42
RB1P06400 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.69■□□□□ 0.42
RB1P06400 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.69■□□□□ 0.42
RB1P06400 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RB1P06400 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RB1P06400 AC017083.2-201ENST00000608069 979 ntBASIC17.69■□□□□ 0.42
RB1P06400 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
RB1P06400 MIR6799-201ENST00000620297 69 ntBASIC17.69■□□□□ 0.42
RB1P06400 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RB1P06400 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.69■□□□□ 0.42
RB1P06400 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.69■□□□□ 0.42
RB1P06400 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RB1P06400 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.69■□□□□ 0.42
RB1P06400 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.69■□□□□ 0.42
RB1P06400 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.69■□□□□ 0.42
RB1P06400 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RB1P06400 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.68■□□□□ 0.42
RB1P06400 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.68■□□□□ 0.42
RB1P06400 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.68■□□□□ 0.42
RB1P06400 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RB1P06400 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RB1P06400 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.68■□□□□ 0.42
RB1P06400 RN7SL752P-201ENST00000463779 287 ntBASIC17.68■□□□□ 0.42
RB1P06400 AC022494.1-201ENST00000466044 728 ntBASIC17.68■□□□□ 0.42
RB1P06400 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.68■□□□□ 0.42
RB1P06400 HILS1-202ENST00000545329 423 ntBASIC17.68■□□□□ 0.42
RB1P06400 AL079307.3-201ENST00000556114 283 ntBASIC17.68■□□□□ 0.42
RB1P06400 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.68■□□□□ 0.42
RB1P06400 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.68■□□□□ 0.42
RB1P06400 AC106886.1-201ENST00000568660 600 ntBASIC17.68■□□□□ 0.42
RB1P06400 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.68■□□□□ 0.42
RB1P06400 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.68■□□□□ 0.42
RB1P06400 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.68■□□□□ 0.42
RB1P06400 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RB1P06400 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.68■□□□□ 0.42
RB1P06400 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RB1P06400 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 FRMD8P1-201ENST00000440433 1524 ntBASIC17.67■□□□□ 0.42
RB1P06400 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.67■□□□□ 0.42
RB1P06400 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 AL354751.1-201ENST00000412768 1863 ntBASIC17.67■□□□□ 0.42
RB1P06400 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RB1P06400 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms