Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COCHO43405 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.36■□□□□ 0.37
COCHO43405 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.35■□□□□ 0.37
COCHO43405 SNX33P1-201ENST00000592116 1762 ntBASIC17.35■□□□□ 0.37
COCHO43405 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
COCHO43405 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.35■□□□□ 0.37
COCHO43405 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
COCHO43405 GPS2P2-201ENST00000430745 888 ntBASIC17.35■□□□□ 0.37
COCHO43405 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.35■□□□□ 0.37
COCHO43405 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.35■□□□□ 0.37
COCHO43405 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COCHO43405 KRT8P23-201ENST00000560090 1207 ntBASIC17.35■□□□□ 0.37
COCHO43405 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.35■□□□□ 0.37
COCHO43405 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.35■□□□□ 0.37
COCHO43405 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.35■□□□□ 0.37
COCHO43405 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COCHO43405 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.35■□□□□ 0.37
COCHO43405 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COCHO43405 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.35■□□□□ 0.37
COCHO43405 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.35■□□□□ 0.37
COCHO43405 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COCHO43405 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.35■□□□□ 0.37
COCHO43405 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.35■□□□□ 0.37
COCHO43405 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.34■□□□□ 0.37
COCHO43405 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.34■□□□□ 0.37
COCHO43405 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.34■□□□□ 0.37
COCHO43405 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COCHO43405 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.34■□□□□ 0.37
COCHO43405 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.34■□□□□ 0.37
COCHO43405 AC027307.2-201ENST00000591252 911 ntBASIC17.34■□□□□ 0.37
COCHO43405 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.34■□□□□ 0.37
COCHO43405 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
COCHO43405 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.34■□□□□ 0.37
COCHO43405 AC008267.7-201ENST00000624570 1194 ntBASIC17.34■□□□□ 0.37
COCHO43405 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 AC084121.4-201ENST00000641598 221 ntBASIC17.34■□□□□ 0.37
COCHO43405 AF228730.8-201ENST00000642140 221 ntBASIC17.34■□□□□ 0.37
COCHO43405 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COCHO43405 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
COCHO43405 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COCHO43405 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
COCHO43405 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
COCHO43405 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.33■□□□□ 0.37
COCHO43405 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
COCHO43405 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.33■□□□□ 0.37
COCHO43405 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COCHO43405 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COCHO43405 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.33■□□□□ 0.36
COCHO43405 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COCHO43405 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
COCHO43405 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COCHO43405 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.33■□□□□ 0.36
COCHO43405 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.33■□□□□ 0.36
COCHO43405 AL138918.1-201ENST00000568306 659 ntBASIC17.33■□□□□ 0.36
COCHO43405 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.33■□□□□ 0.36
COCHO43405 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.33■□□□□ 0.36
COCHO43405 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.33■□□□□ 0.36
COCHO43405 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COCHO43405 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.33■□□□□ 0.36
COCHO43405 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
COCHO43405 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COCHO43405 AP001094.4-201ENST00000579008 2176 ntBASIC17.33■□□□□ 0.36
COCHO43405 AL645728.1-201ENST00000366221 2101 ntBASIC17.33■□□□□ 0.36
COCHO43405 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
COCHO43405 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
COCHO43405 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
COCHO43405 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COCHO43405 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COCHO43405 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COCHO43405 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COCHO43405 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COCHO43405 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COCHO43405 AL391256.1-201ENST00000443260 1855 ntBASIC17.33■□□□□ 0.36
COCHO43405 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
COCHO43405 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms