Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 AC160980.1-201ENSMUST00000224136 970 ntBASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 AC155729.1-201ENSMUST00000227758 544 ntBASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm17435-202ENSMUST00000212699 1998 ntBASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Gm3880A0A1B0GSB3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm10313-201ENSMUST00000095320 1002 ntBASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Map1b-203ENSMUST00000223725 2669 ntBASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms