Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim13Q9CYB0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Gm12350-201ENSMUST00000121208 462 ntBASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Gm44771-201ENSMUST00000206975 626 ntBASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim13Q9CYB0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim13Q9CYB0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim13Q9CYB0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.83□□□□□ -0.35
Trim13Q9CYB0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.83□□□□□ -0.35
Trim13Q9CYB0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms