Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 FAM8A3P-201ENST00000427218 844 ntBASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 BCRP1-201ENST00000444246 691 ntBASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 AC011467.4-201ENST00000594891 528 ntBASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 SNX33P1-201ENST00000592116 1762 ntBASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PAAF1Q9BRP4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 AC006277.1-201ENST00000624348 1610 ntBASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 MIR3197-201ENST00000582241 73 ntBASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 TUBB8P12-201ENST00000308911 1335 ntBASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 TUBB3P1-201ENST00000405796 1332 ntBASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 TUBB7P-202ENST00000428444 1305 ntBASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 TUBB8P7-204ENST00000567960 1332 ntBASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAAF1Q9BRP4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
PAAF1Q9BRP4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.46
PAAF1Q9BRP4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
PAAF1Q9BRP4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 CNN2P2-201ENST00000443536 909 ntBASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 CNN2P3-201ENST00000450201 906 ntBASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 AL136317.3-201ENST00000618497 906 ntBASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAAF1Q9BRP4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAAF1Q9BRP4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PAAF1Q9BRP4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PAAF1Q9BRP4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PAAF1Q9BRP4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PAAF1Q9BRP4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.88■□□□□ 0.45
PAAF1Q9BRP4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms