Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.24□□□□□ -0.61
Sssca1P56873 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Sssca1P56873 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sssca1P56873 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sssca1P56873 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.24□□□□□ -0.61
Sssca1P56873 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.24□□□□□ -0.61
Sssca1P56873 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.24□□□□□ -0.61
Sssca1P56873 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.24□□□□□ -0.61
Sssca1P56873 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sssca1P56873 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Sssca1P56873 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Sssca1P56873 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Sssca1P56873 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sssca1P56873 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sssca1P56873 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Sssca1P56873 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.24□□□□□ -0.61
Sssca1P56873 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sssca1P56873 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.23□□□□□ -0.61
Sssca1P56873 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.23□□□□□ -0.61
Sssca1P56873 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.23□□□□□ -0.61
Sssca1P56873 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.23□□□□□ -0.61
Sssca1P56873 Gm2651-201ENSMUST00000203560 838 ntBASIC11.23□□□□□ -0.61
Sssca1P56873 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.23□□□□□ -0.61
Sssca1P56873 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.23□□□□□ -0.61
Sssca1P56873 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sssca1P56873 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sssca1P56873 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.23□□□□□ -0.61
Sssca1P56873 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sssca1P56873 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sssca1P56873 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sssca1P56873 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sssca1P56873 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.22□□□□□ -0.61
Sssca1P56873 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Gm14140-201ENSMUST00000119999 995 ntBASIC11.22□□□□□ -0.61
Sssca1P56873 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sssca1P56873 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sssca1P56873 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms