Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PDX1P52945 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.4■□□□□ 0.22
PDX1P52945 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.4■□□□□ 0.22
PDX1P52945 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.4■□□□□ 0.22
PDX1P52945 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.4■□□□□ 0.22
PDX1P52945 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.4■□□□□ 0.22
PDX1P52945 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.4■□□□□ 0.22
PDX1P52945 AL139327.4-201ENST00000612362 153 ntBASIC16.4■□□□□ 0.22
PDX1P52945 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDX1P52945 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PDX1P52945 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PDX1P52945 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDX1P52945 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.4■□□□□ 0.22
PDX1P52945 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.4■□□□□ 0.22
PDX1P52945 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
PDX1P52945 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.39■□□□□ 0.22
PDX1P52945 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
PDX1P52945 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDX1P52945 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDX1P52945 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.39■□□□□ 0.21
PDX1P52945 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PDX1P52945 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.39■□□□□ 0.21
PDX1P52945 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.39■□□□□ 0.21
PDX1P52945 AC002056.1-201ENST00000395613 760 ntBASIC16.39■□□□□ 0.21
PDX1P52945 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.39■□□□□ 0.21
PDX1P52945 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.39■□□□□ 0.21
PDX1P52945 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.39■□□□□ 0.21
PDX1P52945 KRT8P48-201ENST00000515599 1220 ntBASIC16.39■□□□□ 0.21
PDX1P52945 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PDX1P52945 AC025678.2-201ENST00000562061 970 ntBASIC16.39■□□□□ 0.21
PDX1P52945 AL390955.2-201ENST00000603032 514 ntBASIC16.39■□□□□ 0.21
PDX1P52945 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDX1P52945 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
PDX1P52945 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDX1P52945 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDX1P52945 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PDX1P52945 AC129492.6-201ENST00000611383 1305 ntBASIC16.39■□□□□ 0.21
PDX1P52945 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PDX1P52945 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PDX1P52945 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDX1P52945 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PDX1P52945 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDX1P52945 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDX1P52945 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.38■□□□□ 0.21
PDX1P52945 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.38■□□□□ 0.21
PDX1P52945 AC020916.1-201ENST00000587762 1774 ntBASIC16.38■□□□□ 0.21
PDX1P52945 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PDX1P52945 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.38■□□□□ 0.21
PDX1P52945 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.38■□□□□ 0.21
PDX1P52945 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.38■□□□□ 0.21
PDX1P52945 AC140658.5-201ENST00000438532 169 ntBASIC16.38■□□□□ 0.21
PDX1P52945 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.38■□□□□ 0.21
PDX1P52945 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.38■□□□□ 0.21
PDX1P52945 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.38■□□□□ 0.21
PDX1P52945 AC015911.4-201ENST00000588022 1070 ntBASIC16.38■□□□□ 0.21
PDX1P52945 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.38■□□□□ 0.21
PDX1P52945 AC026120.1-201ENST00000611536 926 ntBASIC16.38■□□□□ 0.21
PDX1P52945 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.38■□□□□ 0.21
PDX1P52945 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.38■□□□□ 0.21
PDX1P52945 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.38■□□□□ 0.21
PDX1P52945 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.38■□□□□ 0.21
PDX1P52945 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PDX1P52945 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PDX1P52945 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.38■□□□□ 0.21
PDX1P52945 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PDX1P52945 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDX1P52945 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PDX1P52945 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDX1P52945 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms