Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 PTCHD3P3-201ENST00000403073 906 ntBASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 OR7E47P-204ENST00000575924 449 ntBASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 AL353135.1-201ENST00000606729 504 ntBASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 AC105339.1-204ENST00000636249 355 ntBASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDZRN3Q9UPQ7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 STK25P1-201ENST00000585406 838 ntBASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 AC091812.2-201ENST00000619081 385 ntBASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZRN3Q9UPQ7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 AC244107.1-201ENST00000442033 332 ntBASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 AC109462.3-201ENST00000573934 613 ntBASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 REXO1L3P-201ENST00000622202 1288 ntBASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZRN3Q9UPQ7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.77■■□□□ 1.07
PDZRN3Q9UPQ7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PDZRN3Q9UPQ7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PDZRN3Q9UPQ7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 STK19B-204ENST00000512515 211 ntBASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms