Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 MIR346-201ENST00000362234 95 ntBASIC17.81■□□□□ 0.44
SUSD3Q96L08 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.81■□□□□ 0.44
SUSD3Q96L08 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 AP000842.3-202ENST00000569238 1080 ntBASIC17.81■□□□□ 0.44
SUSD3Q96L08 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 Z92544.3-201ENST00000624747 417 ntBASIC17.81■□□□□ 0.44
SUSD3Q96L08 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SUSD3Q96L08 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.81■□□□□ 0.44
SUSD3Q96L08 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 RBPMS2P1-201ENST00000437762 623 ntBASIC17.8■□□□□ 0.44
SUSD3Q96L08 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 SNX33P1-201ENST00000592116 1762 ntBASIC17.8■□□□□ 0.44
SUSD3Q96L08 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 AL671710.1-201ENST00000610245 2349 ntBASIC17.8■□□□□ 0.44
SUSD3Q96L08 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.8■□□□□ 0.44
SUSD3Q96L08 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUSD3Q96L08 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 FAM86GP-201ENST00000448322 971 ntBASIC17.79■□□□□ 0.44
SUSD3Q96L08 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 KRT18P34-201ENST00000488218 1270 ntBASIC17.79■□□□□ 0.44
SUSD3Q96L08 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 SLC25A39P2-201ENST00000537614 270 ntBASIC17.79■□□□□ 0.44
SUSD3Q96L08 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 AL138918.1-201ENST00000568306 659 ntBASIC17.79■□□□□ 0.44
SUSD3Q96L08 AC093512.1-201ENST00000617969 520 ntBASIC17.79■□□□□ 0.44
SUSD3Q96L08 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.79■□□□□ 0.44
SUSD3Q96L08 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUSD3Q96L08 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SUSD3Q96L08 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUSD3Q96L08 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms