Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm5279-201ENSMUST00000199575 745 ntBASIC14.34□□□□□ -0.11
Usp3Q91W36 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC14.34□□□□□ -0.11
Usp3Q91W36 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp3Q91W36 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Usp3Q91W36 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Usp3Q91W36 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Usp3Q91W36 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Usp3Q91W36 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp3Q91W36 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.33□□□□□ -0.12
Usp3Q91W36 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Gm18905-201ENSMUST00000205454 928 ntBASIC14.33□□□□□ -0.12
Usp3Q91W36 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.33□□□□□ -0.12
Usp3Q91W36 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.33□□□□□ -0.12
Usp3Q91W36 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp3Q91W36 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp3Q91W36 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp3Q91W36 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Usp3Q91W36 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.32□□□□□ -0.12
Usp3Q91W36 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp3Q91W36 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Gm12439-201ENSMUST00000117162 365 ntBASIC14.32□□□□□ -0.12
Usp3Q91W36 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.32□□□□□ -0.12
Usp3Q91W36 Gm24420-201ENSMUST00000176676 59 ntBASIC14.32□□□□□ -0.12
Usp3Q91W36 Gm5354-201ENSMUST00000182417 973 ntBASIC14.32□□□□□ -0.12
Usp3Q91W36 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.32□□□□□ -0.12
Usp3Q91W36 Gm37720-201ENSMUST00000195497 1241 ntBASIC14.32□□□□□ -0.12
Usp3Q91W36 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.32□□□□□ -0.12
Usp3Q91W36 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp3Q91W36 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Usp3Q91W36 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp3Q91W36 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp3Q91W36 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Usp3Q91W36 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
Usp3Q91W36 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Mir698-201ENSMUST00000102164 109 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms