Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 BCYRN1-201ENST00000418539 200 ntBASIC20.16■□□□□ 0.82
FOXN1O15353 AC096633.1-201ENST00000422446 749 ntBASIC20.16■□□□□ 0.82
FOXN1O15353 AL513480.1-201ENST00000451731 511 ntBASIC20.16■□□□□ 0.82
FOXN1O15353 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
FOXN1O15353 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
FOXN1O15353 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXN1O15353 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXN1O15353 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
FOXN1O15353 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
FOXN1O15353 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXN1O15353 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXN1O15353 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXN1O15353 FAM185BP-201ENST00000443595 716 ntBASIC20.15■□□□□ 0.82
FOXN1O15353 AC022210.1-201ENST00000449856 793 ntBASIC20.15■□□□□ 0.82
FOXN1O15353 INE1-201ENST00000456273 945 ntBASIC20.15■□□□□ 0.82
FOXN1O15353 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
FOXN1O15353 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXN1O15353 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
FOXN1O15353 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FOXN1O15353 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXN1O15353 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
FOXN1O15353 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXN1O15353 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
FOXN1O15353 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN1O15353 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXN1O15353 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
FOXN1O15353 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FOXN1O15353 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN1O15353 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXN1O15353 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN1O15353 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.14■□□□□ 0.81
FOXN1O15353 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXN1O15353 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.14■□□□□ 0.81
FOXN1O15353 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN1O15353 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN1O15353 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
FOXN1O15353 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXN1O15353 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN1O15353 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.14■□□□□ 0.81
FOXN1O15353 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.14■□□□□ 0.81
FOXN1O15353 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
FOXN1O15353 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.14■□□□□ 0.81
FOXN1O15353 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.14■□□□□ 0.81
FOXN1O15353 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXN1O15353 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.14■□□□□ 0.81
FOXN1O15353 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXN1O15353 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
FOXN1O15353 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.14■□□□□ 0.81
FOXN1O15353 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN1O15353 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN1O15353 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
FOXN1O15353 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXN1O15353 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN1O15353 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN1O15353 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN1O15353 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
FOXN1O15353 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.13■□□□□ 0.81
FOXN1O15353 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 PCDHA12-202ENST00000613593 2588 ntBASIC20.13■□□□□ 0.81
FOXN1O15353 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.13■□□□□ 0.81
FOXN1O15353 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.13■□□□□ 0.81
FOXN1O15353 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
FOXN1O15353 AC092933.1-201ENST00000393644 945 ntBASIC20.13■□□□□ 0.81
FOXN1O15353 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
FOXN1O15353 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.13■□□□□ 0.81
FOXN1O15353 KRT17P8-201ENST00000540749 863 ntBASIC20.13■□□□□ 0.81
FOXN1O15353 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms