Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.43□□□□□ -0.1
Col25a1Q99MQ5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm12616-201ENSMUST00000118594 382 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm1335-201ENSMUST00000121653 386 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm12624-201ENSMUST00000177615 382 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm12621-201ENSMUST00000177760 382 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm12615-201ENSMUST00000177970 382 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm12622-201ENSMUST00000177975 382 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm12627-201ENSMUST00000178412 382 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm12625-201ENSMUST00000179122 382 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm12614-201ENSMUST00000179586 382 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm12613-201ENSMUST00000180323 382 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm7467-201ENSMUST00000185173 652 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm19208-201ENSMUST00000213861 912 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm10608-202ENSMUST00000213924 676 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col25a1Q99MQ5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Celf4-206ENSMUST00000224553 1729 ntBASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Gm14017-201ENSMUST00000121934 386 ntBASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.41□□□□□ -0.1
Col25a1Q99MQ5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms