Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 CYP2A7P1-201ENST00000595391 815 ntBASIC17.44■□□□□ 0.38
CDX2Q99626 AL022328.3-201ENST00000607943 679 ntBASIC17.44■□□□□ 0.38
CDX2Q99626 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDX2Q99626 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.44■□□□□ 0.38
CDX2Q99626 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDX2Q99626 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDX2Q99626 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDX2Q99626 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDX2Q99626 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.44■□□□□ 0.38
CDX2Q99626 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.44■□□□□ 0.38
CDX2Q99626 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.44■□□□□ 0.38
CDX2Q99626 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDX2Q99626 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDX2Q99626 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.43■□□□□ 0.38
CDX2Q99626 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.43■□□□□ 0.38
CDX2Q99626 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.43■□□□□ 0.38
CDX2Q99626 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDX2Q99626 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CDX2Q99626 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.43■□□□□ 0.38
CDX2Q99626 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.43■□□□□ 0.38
CDX2Q99626 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 ACTG1P3-201ENST00000431775 1114 ntBASIC17.43■□□□□ 0.38
CDX2Q99626 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.43■□□□□ 0.38
CDX2Q99626 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.43■□□□□ 0.38
CDX2Q99626 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 RARRES2P5-201ENST00000564013 466 ntBASIC17.43■□□□□ 0.38
CDX2Q99626 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.43■□□□□ 0.38
CDX2Q99626 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.43■□□□□ 0.38
CDX2Q99626 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.43■□□□□ 0.38
CDX2Q99626 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDX2Q99626 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDX2Q99626 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.43■□□□□ 0.38
CDX2Q99626 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.43■□□□□ 0.38
CDX2Q99626 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDX2Q99626 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX2Q99626 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDX2Q99626 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.42■□□□□ 0.38
CDX2Q99626 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDX2Q99626 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CDX2Q99626 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CDX2Q99626 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CDX2Q99626 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX2Q99626 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX2Q99626 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.42■□□□□ 0.38
CDX2Q99626 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDX2Q99626 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDX2Q99626 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.42■□□□□ 0.38
CDX2Q99626 KRT8P22-201ENST00000562317 1415 ntBASIC17.42■□□□□ 0.38
CDX2Q99626 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX2Q99626 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDX2Q99626 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.42■□□□□ 0.38
CDX2Q99626 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.42■□□□□ 0.38
CDX2Q99626 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.42■□□□□ 0.38
CDX2Q99626 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.42■□□□□ 0.38
CDX2Q99626 AC105129.2-201ENST00000559536 390 ntBASIC17.42■□□□□ 0.38
CDX2Q99626 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.42■□□□□ 0.38
CDX2Q99626 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDX2Q99626 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.42■□□□□ 0.38
CDX2Q99626 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CDX2Q99626 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX2Q99626 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX2Q99626 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDX2Q99626 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDX2Q99626 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX2Q99626 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDX2Q99626 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.41■□□□□ 0.38
CDX2Q99626 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDX2Q99626 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDX2Q99626 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.41■□□□□ 0.38
CDX2Q99626 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.41■□□□□ 0.38
CDX2Q99626 ACTG1P17-201ENST00000558391 1119 ntBASIC17.41■□□□□ 0.38
CDX2Q99626 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.41■□□□□ 0.38
CDX2Q99626 MIR5572-201ENST00000583188 137 ntBASIC17.41■□□□□ 0.38
CDX2Q99626 MIR6069-201ENST00000620069 79 ntBASIC17.41■□□□□ 0.38
CDX2Q99626 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.41■□□□□ 0.38
CDX2Q99626 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDX2Q99626 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms