Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ASIC1P78348 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 OR7E14P-202ENST00000530490 1290 ntBASIC18.92■□□□□ 0.62
ASIC1P78348 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.92■□□□□ 0.62
ASIC1P78348 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.92■□□□□ 0.62
ASIC1P78348 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.92■□□□□ 0.62
ASIC1P78348 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.92■□□□□ 0.62
ASIC1P78348 AC006557.2-201ENST00000592985 1240 ntBASIC18.92■□□□□ 0.62
ASIC1P78348 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.92■□□□□ 0.62
ASIC1P78348 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.92■□□□□ 0.62
ASIC1P78348 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.92■□□□□ 0.62
ASIC1P78348 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.92■□□□□ 0.62
ASIC1P78348 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ASIC1P78348 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ASIC1P78348 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ASIC1P78348 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 AL118508.1-201ENST00000613502 2345 ntBASIC18.91■□□□□ 0.62
ASIC1P78348 UBALD1-205ENST00000590891 2641 ntBASIC18.91■□□□□ 0.62
ASIC1P78348 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ASIC1P78348 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.91■□□□□ 0.62
ASIC1P78348 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
ASIC1P78348 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.91■□□□□ 0.62
ASIC1P78348 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ASIC1P78348 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
ASIC1P78348 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 RNPS1P1-201ENST00000507437 918 ntBASIC18.91■□□□□ 0.62
ASIC1P78348 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.91■□□□□ 0.62
ASIC1P78348 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.91■□□□□ 0.62
ASIC1P78348 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 AL121912.1-201ENST00000603683 238 ntBASIC18.91■□□□□ 0.62
ASIC1P78348 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.91■□□□□ 0.62
ASIC1P78348 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.91■□□□□ 0.62
ASIC1P78348 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ASIC1P78348 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.91■□□□□ 0.62
ASIC1P78348 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ASIC1P78348 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ASIC1P78348 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ASIC1P78348 KRT8P49-201ENST00000604166 1432 ntBASIC18.91■□□□□ 0.62
ASIC1P78348 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ASIC1P78348 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ASIC1P78348 AL603756.1-201ENST00000606511 2163 ntBASIC18.91■□□□□ 0.62
ASIC1P78348 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ASIC1P78348 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ASIC1P78348 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.9■□□□□ 0.62
ASIC1P78348 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ASIC1P78348 AL391256.1-201ENST00000443260 1855 ntBASIC18.9■□□□□ 0.62
ASIC1P78348 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.9■□□□□ 0.62
ASIC1P78348 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ASIC1P78348 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ASIC1P78348 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ASIC1P78348 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ASIC1P78348 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.9■□□□□ 0.62
ASIC1P78348 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ASIC1P78348 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.9■□□□□ 0.62
ASIC1P78348 PAWRP1-201ENST00000451083 565 ntBASIC18.9■□□□□ 0.62
ASIC1P78348 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.9■□□□□ 0.62
ASIC1P78348 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.9■□□□□ 0.62
ASIC1P78348 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.9■□□□□ 0.62
ASIC1P78348 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
ASIC1P78348 AL805961.1-202ENST00000641562 540 ntBASIC18.9■□□□□ 0.62
ASIC1P78348 PI4KAP1-204ENST00000612579 1703 ntBASIC18.9■□□□□ 0.62
ASIC1P78348 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ASIC1P78348 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ASIC1P78348 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ASIC1P78348 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ASIC1P78348 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ASIC1P78348 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.9■□□□□ 0.62
ASIC1P78348 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ASIC1P78348 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ASIC1P78348 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.9■□□□□ 0.62
ASIC1P78348 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.9■□□□□ 0.62
ASIC1P78348 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ASIC1P78348 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
ASIC1P78348 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ASIC1P78348 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.89■□□□□ 0.62
ASIC1P78348 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.89■□□□□ 0.62
ASIC1P78348 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
ASIC1P78348 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
ASIC1P78348 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.89■□□□□ 0.61
ASIC1P78348 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms