Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 HLA-J-202ENST00000469281 1241 ntBASIC14.61□□□□□ -0.07
AP3S2P59780 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 AP005242.2-201ENST00000580065 1175 ntBASIC14.61□□□□□ -0.07
AP3S2P59780 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.61□□□□□ -0.07
AP3S2P59780 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 CD177P1-201ENST00000606252 935 ntBASIC14.61□□□□□ -0.07
AP3S2P59780 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
AP3S2P59780 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP3S2P59780 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP3S2P59780 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP3S2P59780 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 AL136379.1-201ENST00000623471 2642 ntBASIC14.61□□□□□ -0.07
AP3S2P59780 AC022532.1-201ENST00000624563 1728 ntBASIC14.61□□□□□ -0.07
AP3S2P59780 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 NUDT16P1-203ENST00000513809 620 ntBASIC14.6□□□□□ -0.07
AP3S2P59780 RNA5SP413-201ENST00000516373 109 ntBASIC14.6□□□□□ -0.07
AP3S2P59780 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 AC024243.1-201ENST00000609234 778 ntBASIC14.6□□□□□ -0.07
AP3S2P59780 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
AP3S2P59780 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 FRMD8P1-201ENST00000440433 1524 ntBASIC14.6□□□□□ -0.07
AP3S2P59780 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
AP3S2P59780 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP3S2P59780 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
AP3S2P59780 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
AP3S2P59780 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
AP3S2P59780 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.59□□□□□ -0.07
AP3S2P59780 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
AP3S2P59780 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 AL135905.2-201ENST00000584934 1404 ntBASIC14.59□□□□□ -0.07
AP3S2P59780 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.59□□□□□ -0.07
AP3S2P59780 AC006058.4-201ENST00000624016 1670 ntBASIC14.59□□□□□ -0.07
AP3S2P59780 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
AP3S2P59780 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
AP3S2P59780 GPR89P-201ENST00000407924 1495 ntBASIC14.59□□□□□ -0.07
AP3S2P59780 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.59□□□□□ -0.07
AP3S2P59780 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.59□□□□□ -0.07
AP3S2P59780 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.59□□□□□ -0.07
AP3S2P59780 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.59□□□□□ -0.07
AP3S2P59780 TSPY12P-201ENST00000421279 868 ntBASIC14.59□□□□□ -0.07
AP3S2P59780 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.59□□□□□ -0.07
AP3S2P59780 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.59□□□□□ -0.07
AP3S2P59780 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.59□□□□□ -0.07
AP3S2P59780 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.59□□□□□ -0.07
AP3S2P59780 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
AP3S2P59780 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms