Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH6P55285 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
CDH6P55285 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 UBALD1-205ENST00000590891 2641 ntBASIC17.64■□□□□ 0.41
CDH6P55285 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH6P55285 PTCHD3P3-201ENST00000403073 906 ntBASIC17.64■□□□□ 0.41
CDH6P55285 ELK2BP-201ENST00000415014 1224 ntBASIC17.64■□□□□ 0.41
CDH6P55285 FAAHP1-202ENST00000446499 1238 ntBASIC17.64■□□□□ 0.41
CDH6P55285 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH6P55285 AC073648.2-201ENST00000510116 352 ntBASIC17.64■□□□□ 0.41
CDH6P55285 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CDH6P55285 AL121912.1-201ENST00000603683 238 ntBASIC17.64■□□□□ 0.41
CDH6P55285 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH6P55285 AC107918.4-202ENST00000641623 219 ntBASIC17.64■□□□□ 0.41
CDH6P55285 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 AC006504.4-201ENST00000592118 1568 ntBASIC17.64■□□□□ 0.41
CDH6P55285 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CDH6P55285 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDH6P55285 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CDH6P55285 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH6P55285 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH6P55285 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
CDH6P55285 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH6P55285 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CDH6P55285 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH6P55285 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDH6P55285 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH6P55285 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDH6P55285 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH6P55285 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH6P55285 RPS2P1-201ENST00000434010 821 ntBASIC17.63■□□□□ 0.41
CDH6P55285 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH6P55285 AC006557.2-201ENST00000592985 1240 ntBASIC17.63■□□□□ 0.41
CDH6P55285 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH6P55285 TP73-AS1-207ENST00000624167 988 ntBASIC17.63■□□□□ 0.41
CDH6P55285 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CDH6P55285 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH6P55285 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDH6P55285 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH6P55285 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH6P55285 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH6P55285 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH6P55285 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CDH6P55285 KRT8P49-201ENST00000604166 1432 ntBASIC17.63■□□□□ 0.41
CDH6P55285 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH6P55285 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH6P55285 AL391256.1-201ENST00000443260 1855 ntBASIC17.63■□□□□ 0.41
CDH6P55285 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH6P55285 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDH6P55285 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH6P55285 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH6P55285 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDH6P55285 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDH6P55285 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDH6P55285 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDH6P55285 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDH6P55285 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDH6P55285 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
CDH6P55285 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 AL603756.1-201ENST00000606511 2163 ntBASIC17.62■□□□□ 0.41
CDH6P55285 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH6P55285 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 PI4KAP1-204ENST00000612579 1703 ntBASIC17.62■□□□□ 0.41
CDH6P55285 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH6P55285 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH6P55285 PAWRP1-201ENST00000451083 565 ntBASIC17.62■□□□□ 0.41
CDH6P55285 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH6P55285 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 OR7E14P-202ENST00000530490 1290 ntBASIC17.62■□□□□ 0.41
CDH6P55285 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH6P55285 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.62■□□□□ 0.41
CDH6P55285 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH6P55285 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CDH6P55285 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH6P55285 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH6P55285 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH6P55285 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
CDH6P55285 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH6P55285 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH6P55285 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms