Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXS1O43638 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
FOXS1O43638 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXS1O43638 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
FOXS1O43638 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXS1O43638 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXS1O43638 RNU1-129P-201ENST00000384064 167 ntBASIC15.88■□□□□ 0.13
FOXS1O43638 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXS1O43638 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 AC112191.1-201ENST00000523689 701 ntBASIC15.88■□□□□ 0.13
FOXS1O43638 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXS1O43638 U1.21-201ENST00000580816 167 ntBASIC15.88■□□□□ 0.13
FOXS1O43638 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXS1O43638 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXS1O43638 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXS1O43638 AL009183.1-201ENST00000603760 355 ntBASIC15.88■□□□□ 0.13
FOXS1O43638 AC099522.2-201ENST00000607001 744 ntBASIC15.88■□□□□ 0.13
FOXS1O43638 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 AC005915.1-201ENST00000624912 2018 ntBASIC15.88■□□□□ 0.13
FOXS1O43638 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
FOXS1O43638 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
FOXS1O43638 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXS1O43638 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXS1O43638 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
FOXS1O43638 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.87■□□□□ 0.13
FOXS1O43638 SNX33P1-201ENST00000592116 1762 ntBASIC15.87■□□□□ 0.13
FOXS1O43638 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
FOXS1O43638 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
FOXS1O43638 AC105020.1-201ENST00000435356 2205 ntBASIC15.87■□□□□ 0.13
FOXS1O43638 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXS1O43638 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 AL391256.1-201ENST00000443260 1855 ntBASIC15.87■□□□□ 0.13
FOXS1O43638 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
FOXS1O43638 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 AC002056.1-201ENST00000395613 760 ntBASIC15.87■□□□□ 0.13
FOXS1O43638 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 CEND1P1-201ENST00000451006 455 ntBASIC15.87■□□□□ 0.13
FOXS1O43638 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXS1O43638 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXS1O43638 AC134684.3-201ENST00000641758 218 ntBASIC15.87■□□□□ 0.13
FOXS1O43638 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
FOXS1O43638 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
FOXS1O43638 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXS1O43638 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXS1O43638 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
FOXS1O43638 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXS1O43638 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXS1O43638 AL671710.1-201ENST00000610245 2349 ntBASIC15.86■□□□□ 0.13
FOXS1O43638 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
FOXS1O43638 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXS1O43638 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXS1O43638 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.86■□□□□ 0.13
FOXS1O43638 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
FOXS1O43638 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
FOXS1O43638 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXS1O43638 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.86■□□□□ 0.13
FOXS1O43638 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXS1O43638 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXS1O43638 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXS1O43638 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXS1O43638 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXS1O43638 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXS1O43638 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXS1O43638 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
FOXS1O43638 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXS1O43638 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
FOXS1O43638 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXS1O43638 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.86■□□□□ 0.13
FOXS1O43638 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXS1O43638 AC211486.1-202ENST00000416371 468 ntBASIC15.86■□□□□ 0.13
FOXS1O43638 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.86■□□□□ 0.13
FOXS1O43638 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
FOXS1O43638 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms