Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC21.05■□□□□ 0.96
RGPD3A6NKT7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC21.05■□□□□ 0.96
RGPD3A6NKT7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.05■□□□□ 0.96
RGPD3A6NKT7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.05■□□□□ 0.96
RGPD3A6NKT7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.05■□□□□ 0.96
RGPD3A6NKT7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD3A6NKT7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD3A6NKT7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD3A6NKT7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD3A6NKT7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD3A6NKT7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 MIR663B-201ENST00000408361 115 ntBASIC21.04■□□□□ 0.96
RGPD3A6NKT7 FXNP2-201ENST00000411625 547 ntBASIC21.04■□□□□ 0.96
RGPD3A6NKT7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 AP000812.2-201ENST00000538934 718 ntBASIC21.04■□□□□ 0.96
RGPD3A6NKT7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 MIR6069-201ENST00000620069 79 ntBASIC21.04■□□□□ 0.96
RGPD3A6NKT7 AL158212.4-201ENST00000624062 1286 ntBASIC21.04■□□□□ 0.96
RGPD3A6NKT7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.04■□□□□ 0.96
RGPD3A6NKT7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RGPD3A6NKT7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 AGER-203ENST00000375065 665 ntTSL 2 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.03■□□□□ 0.96
RGPD3A6NKT7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 AC093724.1-201ENST00000448659 1027 ntBASIC21.02■□□□□ 0.96
RGPD3A6NKT7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 AL021578.1-201ENST00000613646 709 ntBASIC21.02■□□□□ 0.96
RGPD3A6NKT7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RGPD3A6NKT7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
RGPD3A6NKT7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.02■□□□□ 0.95
RGPD3A6NKT7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms