Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Gm9959-201ENSMUST00000068277 390 ntBASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sec61bQ9CQS8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Gm16464-201ENSMUST00000117815 1095 ntBASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Gm7417-201ENSMUST00000192950 473 ntBASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms